\name{pm.abstGrep} \alias{pm.abstGrep} \title{An interface to grep for PubMed abstracts.} \description{ A user friendly interface to the functionality provided by \code{pubmed}. } \usage{ pm.abstGrep(pattern, absts, ...) } \arguments{ \item{pattern}{A pattern for the call to \code{grep}.} \item{absts}{A list containing abstracts downloaded using \code{pubmed} or equivalent.} \item{\dots}{Extra arguments passed to \code{grep}.} } \details{ The \code{absts} are a list of PubMed XML objects that have been downloaded and parsed. This function lets the user quickly search the abstracts for any regular expression. The returned value is a logical vector indicating which of the abstracts contain the regular expression. } \value{ The returned value is a logical vector indicating which of the abstracts contain the regular expression. } \author{Robert Gentleman} \seealso{\code{\link{pm.getabst}}, \code{\link{pm.titles}}} \examples{ library("hgu95av2.db") hoxa9 <- "37809_at" absts <- pm.getabst(hoxa9, "hgu95av2") pm.abstGrep("NUP98", absts[[1]]) pm.abstGrep("apoptosis", absts[[1]]) } \keyword{manip}