\name{human.chrom.info.Jul03} \alias{human.chrom.info.Jul03} % \alias{ex.acgh.hmm} \docType{data} \title{ Basic Chromosomal Information for UCSC Human Genome Assembly July 2003 freeze } \description{ This dataset contains basic chromosomal information for UCSC Human Genome Assembly July 2003 freeze. human.chrom.info.Jul03 is loaded automatically with the aCGH package. } \usage{ human.chrom.info.Jul03 } \format{ A data frame with 24 observations on the following 3 variables. \describe{ \item{chrom}{Chromosomal index, X is coded as 23 and Y as 24.} \item{length}{Length of each chromosome in kilobases.} \item{centromere}{ Location of the centromere on the chromosome (kb). } } } \details{ This file is used for many plotting functions and needs to correspond to \code{\link{clones.info}} mapping file. The centromeric location is approximately extimated by taking mid-point between the last fish-mapped clone on the p-arm and the first fish-mapped clone on the q-arm using relevant UCSC freeze. For an alternative freeze, one needs to manually create a 3-column file of the format described above. } \source{ http://genome.ucsc.edu/cgi-bin/hgText } % \references{ % } \keyword{datasets}