\name{extractAlleles}
\alias{extractAlleles}
\title{
  functions for extracting allele levels, allele pairs, and allele codes
}
\description{
  functions for extracting allele levels, allele pairs, and allele codes
}
\usage{
extractAlleles(object, which = c(1, 2), codes = FALSE,
allow.partial.missing = FALSE, marker, obs)
}
\arguments{
  \item{object}{ geneSet object}
  \item{which}{allele pair number - 1 or 2. Default if both}
  \item{codes}{ If FALSE (default), then calleles are shown as
    characters, else numeric }
  \item{allow.partial.missing}{ Whether partical matching should be
    allowed ( default is FALSE) }
  \item{marker}{ marker names }
  \item{obs}{Number of observations (samples) to be displayed. Default
    is all.}
}
\author{Gregory R. Warnes \email{warnes@bst.rochester.edu} and Nitin Jain \email{nitin.jain@pfizer.com}}
\examples{

}
\keyword{ misc}