prada

Data analysis for cell-based functional assays

Tools for analysing and navigating data from high-throughput phenotyping experiments based on cellular assays and fluorescent detection (flow cytometry (FACS), high-content screening microscopy).

Author	Florian Hahne , Wolfgang Huber , Markus Ruschhaupt , Joern Toedling
Maintainer	Florian Hahne

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("prada")

Documentation

Package Downloads

Removal of contaminants from FACS data

Combining prada output and cellHTS

Reference Manual

Package source	prada_1.18.0.tar.gz
Windows binary	prada_1.18.0.zip
MacOS X 10.4 (Tiger) binary	prada_1.18.0.tgz
MacOS X 10.5 (Leopard) binary	prada_1.18.0.tgz
Package Downloads Report	Downloads Stats

Details

biocViews	CellBasedAssays , Visualization
Depends	R , Biobase , RColorBrewer , grid , methods , rrcov
Imports	MASS , KernSmooth , RColorBrewer , geneplotter
Suggests	cellHTS , rflowcyt , tcltk
System Requirements
License	LGPL
URL	http://www.dkfz.de/mga/whuber, http://www.dkfz.de/LIFEdb
Depends On Me	RNAither , cellHTS2 , cellHTS , domainsignatures , rflowcyt
Imports Me
Suggests Me
Development History	Bioconductor Changelog