\name{euks} \alias{euks} \docType{data} \title{ Eukaryotic genomes at NCBI } \description{ Eukaryotic genome sequencing projects at NCBI } \usage{data(euks)} \format{ A genomes data frame with observations on the following 17 variables. \describe{ \item{\code{acc}}{ BioProject Accession number } \item{\code{name}}{ Organism name } \item{\code{status}}{ Highest level of assembly; Chromosome, Scaffolds, SRA or No data} \item{\code{released}}{First public sequence release} \item{\code{group}}{Phylum} \item{\code{subgroup}}{Class level} \item{\code{size}}{Total length of DNA (Mb)} \item{\code{gc}}{Percent GC (guanine or cytosine)} \item{\code{assembly}}{Name of the genome assembly (from NCBI Assembly database)} \item{\code{chromosomes}}{Number of chromosomes } \item{\code{organelles}}{Number of organelles} \item{\code{plasmids}}{Number of plasmids} \item{\code{wgs}}{Four-letter Accession prefix followed by version} \item{\code{scaffolds}}{Number of scaffolds} \item{\code{genes}}{Number of genes} \item{\code{proteins}}{Number of proteins} \item{\code{modified}}{Sequence modification date} } } \details{Excludes projects that represent only organelles} \source{ downloaded from \url{ftp.ncbi.nlm.nih.gov/genomes/GENOME_REPORTS/eukaryotes.txt } } %\references{} \examples{ data(euks) euks t(euks[1,]) plot(euks) summary(euks) table2(euks$subgroup) } \keyword{datasets}