\name{attractorSummary} \alias{attractorSummary} \title{Summarize Attractors} \description{ This function summarizes the posterior probability of possible attractors. } \usage{ attractorSummary(tpost, post.prob.limit = 0.01, wildtype = TRUE) } \arguments{ \item{tpost}{a ternaryPost object} \item{post.prob.limit}{the minimum posterior probability for an attractor to be listed} \item{wildtype}{if TRUE, the wildtype attractors are summarized; if FALSE, the perturbed attractors are summarized.} } \value{ The function returns a matrix of attractors and posterior probabilities for each perturbation. } \author{Matthew N. McCall and Anthony Almudevar} \seealso{Almudevar A, McCall MN, McMurray H, Land H (2011). Fitting Boolean Networks from Steady State Perturbation Data, Statistical Applications in Genetics and Molecular Biology, 10(1): Article 47.} \examples{ ssObj <- matrix(c(1,1,1,0,1,1,0,0,1),nrow=3) pObj <- matrix(c(1,0,0,0,1,0,0,0,1),nrow=3) rownames(ssObj) <- rownames(pObj) <- colnames(ssObj) <- colnames(pObj) <- c("Gene1","Gene2","Gene3") tnfitObj <- tnetfit(ssObj, pObj) tnpostObj <- tnetpost(tnfitObj, mdelta=10, msample=10) attractorSummary(tnpostObj) } \keyword{manip}