\name{nucleosome_tiling} \alias{nucleosome_tiling} \docType{data} \title{ Example intensities from Tiling Microarray nucleosome positioning experiment } \description{ Some bases from S.cerevisiae tiling microarray where mononucleosomes were sequenced and hybridizated with histone-free naked DNA. The intensity is the normalized ratio between the intensities from nucleosomic and naked DNA. Due to the difficulty of providing a raw file, this file has been preprocessed. See details. } \usage{data(nucleosome_tiling)} \format{ \code{numeric} vector with the intensities. } \details{ The raw .CEL files from Affymetrix S.Cerevisiae Tilling 1.0R Array (3 nucleosomal + 3 naked DNA) has been merged using package \code{Starr} and the resulting \code{ExpressionSet} object has been passed to \code{processTilingArray} function from this package as follows: \code{processTilingArray(data, exprName, chrPAttern="Sc:Oct_2003;chr1", closeGaps=50)} The first 8000bp of the chr1 have been saved as this example dataset. } \source{ Publication pending } \keyword{datasets}