\name{limmaAnalysis-methods} \docType{methods} \alias{limmaAnalysis-methods} \alias{limmaAnalysis,ExpressionSet,matrix,character-method} \alias{limmaAnalysis,matrix,matrix,character-method} \title{Methods for Function \code{limmaAnalysis} in Package \pkg{birta}} \description{ Generic methods for function \code{limmaAnalysis} in package \pkg{birta}. The expression data can be stored in a matrix or an ExpressionSet. } \section{Methods}{ \describe{ \item{\code{signature(dat = "ExpressionSet", design = "matrix", contrasts = "character")}}{ Generic function for objects of class ExpressionSet. } \item{\code{signature(dat = "matrix", design = "matrix", contrasts = "character")}}{ Generic function for objects of class matrix. } }} \keyword{methods} \keyword{manip}