\name{row.spearman} \alias{row.spearman} \title{ Compute Spearmans rank-based correlation of many variables with a variable x } \description{ For each row of the data matrix Y, compute its Spearman correlation with x. } \usage{ row.spearman(Y, x) } \arguments{ \item{Y}{ a data matrix with rows for variables and columns for subjects } \item{x}{ a vector of the variable to be associated with each row of Y } } \value{ A data.frame with three components: \item{stat }{a vector with the Spearman correlation for each row of Y} \item{pval }{a vector with the p-value for each row of Y} \item{ebp}{a vector with the estimated empirical Bayes probability of zero correlation for each row of Y} } \references{ Spearman, C. (1904) The proof and measurement of association between two things. Amer. J. Psychol. 15:72-101. } \author{ Stan Pounds <\email{stanley.pounds@stjude.org}>; Demba Fofana <\email{demba.fofana@stjude.org}> } \examples{ ####################Correlation Study##################### # load data data(correlation.data) # Read the expression values Y<-exprs(correlation.data) # Read the phenotype x<-pData(correlation.data) x[,1] #Spearman Test row.spearman(Y,x[,1]) } \keyword{ Multiple comparison}