\name{getBiocPlatformMap} \alias{getBiocPlatformMap} \title{Get mappings between GPL and Bioconductor microarry annotation packages} \description{ Query the gpl table and get GPL information of a given list of Bioconductor microarry annotation packages. Note currently the GEOmetadb does not contains all the mappings, but we are trying to construct a relative complete list. } \usage{ getBiocPlatformMap(con, bioc='all') } \arguments{ \item{con}{Connection to the GEOmetadb.sqlite database} \item{bioc}{Character vector of Biocondoctor microarry annotation packages, e.g. c('hgu133plus2','hgu95av2'). 'all' returns all mappings. } } \value{ A six-column data.frame including GPL title, GPL accession, bioc_package, manufacturer, organism, data_row_count. } \references{http://meltzerlab.nci.nih.gov/apps/geo} \author{Jack Zhu , Sean Davis } \examples{ if(file.exists('GEOmetadb.sqlite')) { con <- dbConnect(SQLite(), "GEOmetadb.sqlite") getBiocPlatformMap(con)[1:5,] getBiocPlatformMap(con, bioc=c('hgu133a','hgu95av2')) dbDisconnect(con) } else { print("You will need to usethe getSQLiteFile() function to get a copy of the SQLite database file before this example will work") } } \keyword{ database }