\name{enrichDO} \alias{enrichDO} \title{DO Enrichment Analysis of a gene set.} \usage{ enrichDO(gene, pvalueCutoff = 0.05, qvalueCutoff = 0.05, readable = F) } \arguments{ \item{gene}{a vector of entrez gene id.} \item{pvalueCutoff}{Cutoff value of pvalue.} \item{qvalueCutoff}{Cutoff value of qvalue.} \item{readable}{whether mapping gene ID to gene Name} } \value{ A \code{enrichResult} instance. } \description{ Given a vector of genes, this function will return the enrichment DO categories with FDR control. } \examples{ set.seed(123) data(EG2DO) gene = sample(names(EG2DO), 30) yy = enrichDO(gene, pvalueCutoff=0.05) summary(yy) } \author{ Guangchuang Yu \url{http://ygc.name} } \seealso{ \code{\link{enrichResult-class}} } \keyword{manip}