% --- Source file: Xdata.Rd --- \name{Xdata} \alias{Xdata} %\docType{package} \title{ Sample covariate and outcome data } \description{ Sample covariate and outcome data for \code{\link{snp.scan.logistic}} } \details{ The data is taken from an ovarian cancer study. The file Xdata.txt is a tab-delimited type 3 data set (see \code{file.type} in \code{\link{pheno.list}}). It contains the variables: \itemize{ \item \code{id} The subject id \item \code{case.control} Ovarian cancer status (0, 1) \item \code{BRCA.status} Simulated data for breast cancer status (0, 1) \item \code{oral.years} Years of oral contraceptive use \item \code{n.children} Number of children \item \code{age.group} Age group in 5 categories (1-5) \item \code{ethnic.group} Ethnic group in 3 categories (1-3) \item \code{BRCA.history} Personal history of breast cancer (0,1) \item \code{gynSurgery.history} History of gynechological surgery (0, 1, 2) \item \code{family.history} Family history of breast/ovarian cancer (0, 1, 2) } } \examples{ # Load and print the first 5 rows data(Xdata, package="CGEN") Xdata[1:5, ] } \keyword{data}