\name{@ANNOBJPREFIX@PATH} \alias{@ANNOBJPREFIX@PATH} \title{Mappings between TAIR identifiers and KEGG pathway identifiers} \description{ KEGG (Kyoto Encyclopedia of Genes and Genomes) maintains pathway data for various organisms. @ANNOBJPREFIX@PATH maps TAIR identifiers to the identifiers used by KEGG for pathways in which the genes represented by the TAIR identifiers are involved } \details{ Each KEGG pathway has a name and identifier. Pathway name for a given pathway identifier can be obtained using the KEGG data package that can either be built using AnnBuilder or downloaded from Bioconductor \url{http://www.bioconductor.org}. Graphic presentations of pathways are searchable at url http://www.genome.ad.jp/kegg/pathway.html by using pathway identifiers as keys. Mappings were based on data provided by: @PATHSOURCE@ } \references{ \url{http://www.genome.ad.jp/kegg/} } \examples{ x <- @ANNOBJPREFIX@PATH # Get the TAIR identifiers that are mapped to a KEGG pathway ID mapped_genes <- mappedkeys(x) # Convert to a list xx <- as.list(x[mapped_genes]) if(length(xx) > 0) { # Get the PATH for the first five genes xx[1:5] # Get the first one xx[[1]] } } \keyword{datasets}