To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("AffyExpress")
In most cases, you don't need to download the package archive at all.
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This package is for version 2.10 of Bioconductor; for the stable, up-to-date release version, see AffyExpress.
Bioconductor version: 2.10
The purpose of this package is to provide a comprehensive and easy-to-use tool for quality assessment and to identify differentially expressed genes in the Affymetrix gene expression data.
Author: Xiwei Wu <xwu at coh.org>, Xuejun Arthur Li <xueli at coh.org>
Maintainer: Xuejun Arthur Li <xueli at coh.org>
Citation (from within R,
enter citation("AffyExpress")
):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("AffyExpress")
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("AffyExpress")
1. Primer | ||
Reference Manual |
biocViews | Annotation, Bioinformatics, DifferentialExpression, Microarray, OneChannel, Preprocessing, QualityControl, ReportWriting, Software, Visualization |
Version | 1.22.0 |
In Bioconductor since | BioC 2.1 (R-2.6) (8.5 years) |
License | LGPL |
Depends | R (>= 2.10), affy(>= 1.23.4), limma |
Imports | |
LinkingTo | |
Suggests | simpleaffy, R2HTML, affyPLM, hgu95av2cdf, hgu95av2, test3cdf, genefilter, estrogen, annaffy, gcrma |
SystemRequirements | |
Enhances | |
URL | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Package Source | AffyExpress_1.22.0.tar.gz |
Windows Binary | AffyExpress_1.22.0.zip |
Mac OS X 10.6 (Snow Leopard) | |
Subversion source | (username/password: readonly) |
Git source | https://github.com/Bioconductor-mirror/AffyExpress/tree/release-2.10 |
Package Short Url | http://bioconductor.org/packages/AffyExpress/ |
Package Downloads Report | Download Stats |
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