- Home
- Help
- Courses and Conferences
- 2012
- Bioconductor European Developers' Workshop 2012
Bioconductor European Developers' Workshop 2012
Zurich, Switzerland
2012-12-13 ~ 2012-12-14
Instructors
- Alicja Szabelska
- Andrea Riebler
- Andreas Heider
- Anita Lerch
- Anna Lesniewska
- Antti Honkela
- Arne Mueller
- Benilton Carvalho
- Bernd Fischer
- Christian Panse
- Crispin Miller
- Danny Bitton
- Felix Klein
- Florian Hahne
- Henrik Bengtsson
- Julian Gehring
- Julie Zhu
- Julius Mueller
- Lenka Radova
- Maciej Beresewicz
- Mark Robinson
- Marta Rosikiewicz
- Martin Morgan
- Masaomi Hatakeyama
- Mattia Pelizzola
- Michal Okoniewski
- Mike Love
- Moritz Gerstung
- Nicolas Delhomme
- Paul Newcombe
- Przemyslaw Biecek
- Raffaele Calogero
- Robert Castelo
- Robert Scharpf
- Rory Stark
- Simon Anders
- Szymon Kielbasa
- Tim Yates
- Torsten Hothorn
- Valerie Obenchain
- Willem Ligtenberg
Description
Materials
Overview of Bioconductor - Martin Morgan
Containers for Integrative and Experimental Data - Martin Morgan
Rejoinder - Martin Morgan
Integrated Analysis Of ChIP-seq/chip using ChIPpeakAnno and GeneNetworkBuilder - Lihua Julie Zhu
The QTLseq Package - Przemyslaw Biecek
Finding de novo copy number variants in case-parent trios for oral clefts - Rob Scharpf
A brief tour of the ENSEMBL REST API - Tim Yates
Reproducible Statistical Analyses Today - Torston Hothorn
VariantAnnotation and ensemblVEP - Valerie Obenchain
Counting with summarizeOverlaps - Valerie Obenchain
BayMeth: Improved DNA methylation quantification for affinity capture sequencing data - Andrea Riebler
Complete ChIP-seq, RNA-seq and Bis-seq analysis work-flow with R/Bioconductor and QuasR - Anita Lerch
methylPipe: a library for the analysis of base-resolution DNA methylation data - Mattia Pelizzola
reactome.db - Willem Ligtenberg
rnaSeqMap library in use - Anna_Leśniewska
aroma.seq: Bringing sequence analysis to the Aroma Framework - Henrik Bengtsson
Open-source software for bioinformatics: parallel computing and large datasets with R - Benilton Carvalho
featureDB – storing and querying genomic annotation - Arne Müeller
Visualizing genomic features with the Gviz package - Florian Hahne
A brief introduction to TransView - Julius Müller
SparseData - Michael Love
easyRNAseq Where from, where to? - Nicolas Delhomme
Observations of a year as a Bioconductor pipeline package developer - Rory Stark
Differential expression analysis for sequencing count data - Simon Anders
Representation and parallelism in genomic QTL discovery - Vince Carey
Chimera - A package for secondary analysis of fusion products - Raffaele A Calogero
A Multi-Language Environment for Reproducible Research - Julian Gehring
Exon array case study - Lenka Radova
The qpgraph package: Network inference and eQTL mapping - Robert Castelo