xmapcore

Core access to the xmap database (installed separately)

Bioconductor version: Development (2.8)

xmapcore allows mapping between genetic features and any available Affymetrix Exon arrays for Homo Sapiens, Mus Musculus, Rattus Norvegicus and Schizosaccharomyces Pombe.

Author: Tim Yates

Maintainer: Tim Yates

To install this package, start R and enter:

source("http:///biocLite.R")
biocLite("xmapcore")    

Documentation

PDF		cookbook.pdf
PDF		SplicingIndexExample.pdf
PDF	R Script	xmapcore installation instruction
PDF	R Script	xmapcore primer

Reference Manual

Details

biocViews	Annotation, Bioinformatics, Microarray, OneChannel, ReportWriting, Transcription, Visualization
Depends	R, methods, IRanges
Imports	DBI, RMySQL, digest, Biobase
Suggests	RUnit
System Requirements
License	GPL-2
URL	http://xmap.picr.man.ac.uk, http://www.bioconductor.org
Depends On Me	rnaSeqMap
Imports Me
Suggests Me
Version	1.5.4

Package Downloads

Package Source	xmapcore_1.5.4.tar.gz
Windows Binary
MacOS 10.5 (Leopard) binary	xmapcore_1.5.4.tgz
Package Downloads Report	Download Stats