flowFlowJo

Tools for extracting information from a FlowJo workspace and working with the data in the flowCore paradigm.

Bioconductor version: Development (2.8)

FlowJo is a commercial GUI based software package from TreeStar Inc. for the visualization and analysis of flow cytometry data. One of the FlowJo standard export file types is the "FlowJo Workspace". This is an XML document that describes files and manipulations that have been performed in the FlowJo GUI environment. This package can take apart the FlowJo workspace and deliver the data into R in the flowCore paradigm.

Author: John J. Gosink

Maintainer: John J. Gosink

To install this package, start R and enter:

source("http:///biocLite.R")
biocLite("flowFlowJo")    

Documentation

PDF

R Script

Basic Functions for working with FlowJo

Reference Manual

Details

biocViews	FlowCytometry
Depends	R, MASS
Imports	flowCore, XML, methods, Biobase
Suggests
System Requirements
License	GPL (>=3)
URL
Depends On Me
Imports Me
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Version	1.9.0

Package Downloads

Package Source	flowFlowJo_1.9.0.tar.gz
Windows Binary	flowFlowJo_1.9.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary	flowFlowJo_1.9.0.tgz
Package Downloads Report	Download Stats