affypdnn

Probe Dependent Nearest Neighbours (PDNN) for the affy package

Bioconductor version: Development (2.8)

The package contains functions to perform the PDNN method described by Li Zhang et al.

Author: H. Bjorn Nielsen and Laurent Gautier (Many thanks to Li Zhang early communications about the existence of the PDNN program and related publications).

Maintainer: Laurent Gautier

To install this package, start R and enter:

source("http:///biocLite.R")
biocLite("affypdnn")    

Documentation

PDF

R Script

affypdnn

Reference Manual

Details

biocViews	OneChannel, Microarray, Preprocessing
Depends	R, affy
Imports
Suggests	affydata, hgu95av2probe
System Requirements
License	LGPL
URL
Depends On Me
Imports Me
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Version	1.25.0

Package Downloads

Package Source	affypdnn_1.25.0.tar.gz
Windows Binary	affypdnn_1.25.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary	affypdnn_1.25.0.tgz
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