CALIB

Calibration model for estimating absolute expression levels from microarray data

Bioconductor version: Development (2.8)

This package contains functions for normalizing spotted microarray data, based on a physically motivated calibration model. The model parameters and error distributions are estimated from external control spikes.

Author: Hui Zhao, Kristof Engelen, Bart De Moor and Kathleen Marchal

Maintainer: Hui Zhao

To install this package, start R and enter:

source("http:///biocLite.R")
biocLite("CALIB")    

Documentation

PDF	R Script	CALIB Overview
PDF		readme.pdf

Reference Manual

Details

biocViews	Microarray, TwoChannel, Preprocessing
Depends	R, limma, methods
Imports	limma, methods, graphics, stats, utils
Suggests
System Requirements
License	LGPL
URL
Depends On Me
Imports Me
Suggests Me
Version	1.17.0

Package Downloads

Package Source	CALIB_1.17.0.tar.gz
Windows Binary	CALIB_1.17.0.zip (32-bit only)
MacOS 10.5 (Leopard) binary	CALIB_1.17.0.tgz
Package Downloads Report	Download Stats