############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data chromstaR ### ############################################################################## ############################################################################## * checking for file ‘chromstaR/DESCRIPTION’ ... OK * preparing ‘chromstaR’: * checking DESCRIPTION meta-information ... OK * cleaning src * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘chromstaR.Rnw’ using knitr 2024-12-30 20:40:02.233 R[93928:104622958] XType: Using static font registry. 2024-12-30 20:40:02.234 R[93929:104622959] XType: Using static font registry. 2024-12-30 20:40:02.463 R[93931:104622961] XType: Using static font registry. 2024-12-30 20:40:47.496 R[94298:104623996] XType: Using static font registry. 2024-12-30 20:40:47.524 R[94299:104623997] XType: Using static font registry. 2024-12-30 20:40:48.175 R[94300:104623999] XType: Using static font registry. 2024-12-30 20:40:48.219 R[94297:104623998] XType: Using static font registry. 2024-12-30 20:42:21.282 R[95065:104626464] XType: Using static font registry. 2024-12-30 20:42:21.405 R[95066:104626466] XType: Using static font registry. 2024-12-30 20:42:21.422 R[95067:104626467] XType: Using static font registry. 2024-12-30 20:42:22.056 R[95063:104626465] XType: Using static font registry. Quitting from lines 536-555 [combined_enrichment] (chromstaR.Rnw) Error: processing vignette 'chromstaR.Rnw' failed with diagnostics: The given dataset: rnorvegicus_gene_ensembl , is not valid. Correct dataset names can be obtained with the listDatasets() function. --- failed re-building ‘chromstaR.Rnw’ SUMMARY: processing the following file failed: ‘chromstaR.Rnw’ Error: Vignette re-building failed. Execution halted