############################################################################## ############################################################################## ### ### Running command: ### ### chmod a+r MAGeCKFlute -R && F:\biocbuild\bbs-3.20-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data MAGeCKFlute ### ############################################################################## ############################################################################## * checking for file 'MAGeCKFlute/DESCRIPTION' ... OK * preparing 'MAGeCKFlute': * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building 'MAGeCKFlute.Rmd' using rmarkdown Warning: ggrepel: 5 unlabeled data points (too many overlaps). Consider increasing max.overlaps Warning: ggrepel: 8 unlabeled data points (too many overlaps). Consider increasing max.overlaps Warning in grid.Call(C_textBounds, as.graphicsAnnot(x$label), x$x, x$y, : font family not found in Windows font database Warning in grid.Call(C_textBounds, as.graphicsAnnot(x$label), x$x, x$y, : font family not found in Windows font database Warning in grid.Call(C_textBounds, as.graphicsAnnot(x$label), x$x, x$y, : font family not found in Windows font database Warning in grid.Call(C_textBounds, as.graphicsAnnot(x$label), x$x, x$y, : font family not found in Windows font database Warning in grid.Call(C_textBounds, as.graphicsAnnot(x$label), x$x, x$y, : font family not found in Windows font database Warning in grid.Call(C_textBounds, as.graphicsAnnot(x$label), x$x, x$y, : font family not found in Windows font database Warning in grid.Call(C_textBounds, as.graphicsAnnot(x$label), x$x, x$y, : font family not found in Windows font database Warning in grid.Call.graphics(C_text, as.graphicsAnnot(x$label), x$x, x$y, : font family not found in Windows font database Warning in grid.Call.graphics(C_text, as.graphicsAnnot(x$label), x$x, x$y, : font family not found in Windows font database Warning in grid.Call.graphics(C_text, as.graphicsAnnot(x$label), x$x, x$y, : font family not found in Windows font database Warning in grid.Call.graphics(C_text, as.graphicsAnnot(x$label), x$x, x$y, : font family not found in Windows font database Warning in grid.Call.graphics(C_text, as.graphicsAnnot(x$label), x$x, x$y, : font family not found in Windows font database Warning in grid.Call.graphics(C_text, as.graphicsAnnot(x$label), x$x, x$y, : font family not found in Windows font database Warning in grid.Call.graphics(C_text, as.graphicsAnnot(x$label), x$x, x$y, : font family not found in Windows font database Warning in grid.Call.graphics(C_text, as.graphicsAnnot(x$label), x$x, x$y, : font family not found in Windows font database Warning: ggrepel: 3 unlabeled data points (too many overlaps). Consider increasing max.overlaps Warning: ggrepel: 5 unlabeled data points (too many overlaps). Consider increasing max.overlaps Warning: ggrepel: 10 unlabeled data points (too many overlaps). Consider increasing max.overlaps Warning: ggrepel: 5 unlabeled data points (too many overlaps). Consider increasing max.overlaps --- finished re-building 'MAGeCKFlute.Rmd' --- re-building 'MAGeCKFlute_enrichment.Rmd' using rmarkdown Quitting from lines 104-110 [enrichplot] (MAGeCKFlute_enrichment.Rmd) Error: processing vignette 'MAGeCKFlute_enrichment.Rmd' failed with diagnostics: invalid first argument --- failed re-building 'MAGeCKFlute_enrichment.Rmd' SUMMARY: processing the following file failed: 'MAGeCKFlute_enrichment.Rmd' Error: Vignette re-building failed. Execution halted