############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data inveRsion ### ############################################################################## ############################################################################## * checking for file ‘inveRsion/DESCRIPTION’ ... OK * preparing ‘inveRsion’: * checking DESCRIPTION meta-information ... OK * cleaning src * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘inveRsion.Rnw’ using Sweave Loading required package: haplo.stats Loading required package: arsenal Hola! welcome to inevRsion package. type: manual() for full manual vignette("inveRsion") for a quick start Warning: Package 'inveRsion' is deprecated and will be removed from Bioconductor version 3.17 -Code haplotypes- reading data from haplotype file: /private/tmp/RtmpsO7mGv/Rinst1245f2fffc378/inveRsion/extdata/haplotypesROI.txt preparing data Number of brakepoints: 248 Error: processing vignette 'inveRsion.Rnw' failed with diagnostics: chunk 3 Error in lociPos[lociSel]/10^6 : non-numeric argument to binary operator --- failed re-building ‘inveRsion.Rnw’ SUMMARY: processing the following file failed: ‘inveRsion.Rnw’ Error: Vignette re-building failed. Execution halted