Wolfgang Huber
| Snapshot Date: 2020-04-14 16:46:13 -0400 (Tue, 14 Apr 2020) |
| URL: https://git.bioconductor.org/packages/vsn |
| Branch: RELEASE_3_10 |
| Last Commit: bac14b8 |
| Last Changed Date: 2019-10-29 13:07:23 -0400 (Tue, 29 Oct 2019) |
| Back to Multiple platform build/check report for BioC 3.10 |
|
This page was generated on 2020-04-15 12:16:40 -0400 (Wed, 15 Apr 2020).
| Package 1796/1823 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| vsn 3.54.0 Wolfgang Huber
| malbec1 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | [ OK ] | | ||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: vsn |
| Version: 3.54.0 |
| Command: rm -rf vsn.buildbin-libdir && mkdir vsn.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=vsn.buildbin-libdir vsn_3.54.0.tar.gz |
| StartedAt: 2020-04-15 09:53:19 -0400 (Wed, 15 Apr 2020) |
| EndedAt: 2020-04-15 09:53:51 -0400 (Wed, 15 Apr 2020) |
| EllapsedTime: 31.8 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: vsn_3.54.0.zip |
| PackageFileSize: 1.498 MiB |
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### Running command:
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### rm -rf vsn.buildbin-libdir && mkdir vsn.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=vsn.buildbin-libdir vsn_3.54.0.tar.gz
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install for i386
* installing *source* package 'vsn' ...
** using staged installation
** libs
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=core2 -c init.c -o init.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=core2 -c vsn.c -o vsn.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=core2 -c vsn2.c -o vsn2.o
C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o vsn.dll tmp.def init.o vsn.o vsn2.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.10-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.10-bioc/meat/vsn.buildbin-libdir/00LOCK-vsn/00new/vsn/libs/i386
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'vsn'
finding HTML links ... done
class.vsn html
class.vsnInput html
justvsn html
kidney html
lymphoma html
meanSdPlot html
Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/RtmpOkSVem/R.INSTALL164c7ef456a1/vsn/man/meanSdPlot.Rd:43: file link 'stat_binhex' in package 'ggplot2' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/RtmpOkSVem/R.INSTALL164c7ef456a1/vsn/man/meanSdPlot.Rd:44: file link 'stat_binhex' in package 'ggplot2' does not exist and so has been treated as a topic
normalize.AffyBatch.vsn html
sagmbSimulateData html
scalingFactorTransformation html
vsn-package html
vsn2 html
vsn2trsf html
vsnLikelihood html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'vsn' ...
** libs
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=core2 -c init.c -o init.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=core2 -c vsn.c -o vsn.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=core2 -c vsn2.c -o vsn2.o
C:/Rtools/mingw_64/bin/gcc -shared -s -static-libgcc -o vsn.dll tmp.def init.o vsn.o vsn2.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.10-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.10-bioc/meat/vsn.buildbin-libdir/vsn/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'vsn' as vsn_3.54.0.zip
* DONE (vsn)