Package: flowViz

Version: 1.23.3

Command: rm -rf flowViz.buildbin-libdir && mkdir flowViz.buildbin-libdir && E:\biocbld\bbs-2.12-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=flowViz.buildbin-libdir flowViz_1.23.3.tar.gz >flowViz-install.out 2>&1 && E:\biocbld\bbs-2.12-bioc\R\bin\R.exe CMD check --library=flowViz.buildbin-libdir --install="check:flowViz-install.out" --force-multiarch --no-vignettes --timings flowViz_1.23.3.tar.gz && mv flowViz.buildbin-libdir/* flowViz.Rcheck/ && rmdir flowViz.buildbin-libdir

StartedAt: 2013-03-25 02:25:33 -0700 (Mon, 25 Mar 2013)

EndedAt: 2013-03-25 02:30:20 -0700 (Mon, 25 Mar 2013)

EllapsedTime: 287.4 seconds

RetCode: 0

Status:  OK

CheckDir: flowViz.Rcheck

Warnings: 0

* using log directory 'E:/biocbld/bbs-2.12-bioc/meat/flowViz.Rcheck'
* using R version 3.0.0 beta (2013-03-19 r62328)
* using platform: i386-w64-mingw32 (32-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'flowViz/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'flowViz' version '1.23.3'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'flowViz' can be installed ... OK
* checking installed package size ... NOTE
  installed size is  9.5Mb
  sub-directories of 1Mb or more:
    doc   9.2Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
gltext: no visible global function definition for 'unit'
gltext: no visible global function definition for 'gpar'
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking installed files from 'inst/doc' ... OK
* checking examples ...
** running examples for arch 'i386' ... [89s] OK
Examples with CPU or elapsed time > 5s
                        user system elapsed
xyplot                 23.28   0.08   23.59
densityplot            13.32   0.33   13.65
splom                  12.50   0.11   12.78
ecdfplot               11.98   0.31   12.30
latticeMethods-flowSet 10.42   0.19   10.70
timeLinePlot-methods    8.98   0.03    9.03
** running examples for arch 'x64' ... [101s] OK
Examples with CPU or elapsed time > 5s
                        user system elapsed
xyplot                 26.05   0.09   26.19
ecdfplot               15.66   0.43   16.10
latticeMethods-flowSet 15.21   0.17   15.38
densityplot            13.23   0.55   13.77
splom                  13.54   0.17   13.91
timeLinePlot-methods    8.16   0.08    8.27
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignettes ... SKIPPED
* checking PDF version of manual ... OK

NOTE: There were 2 notes.
See
  'E:/biocbld/bbs-2.12-bioc/meat/flowViz.Rcheck/00check.log'
for details.

install for i386

* installing *source* package 'flowViz' ...
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
   'filters.Rnw' 
** testing if installed package can be loaded

install for x64

* installing *source* package 'flowViz' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'flowViz' as flowViz_1.23.3.zip
* DONE (flowViz)