Checks validity of all inputs of CARNIVAL
isInputValidCarnival( perturbations = NULL, measurements, priorKnowledgeNetwork, weights = NULL, carnivalOptions = defaultLpSolveCarnivalOptions() )
perturbations | (optional, if inverse CARNIVAL flavour is used further) vector of targets of perturbations. |
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measurements | vector of the measurements (i.e. DoRothEA/VIPER normalised enrichment scores) |
priorKnowledgeNetwork | data frame of the prior knowledge network |
weights | (optional) vector of the additional weights: e.g. PROGENy pathway scores or measured protein activities. |
carnivalOptions | the list of options for the run. See defaultLpSolveCarnivalOptions(), defaultCplexCarnivalOptions, defaultCbcCarnivalOptions. |
TRUE if everything passed the checks.