BiocFileCache, ChIPpeakAnno, chipseqDBData, csaw, edgeR, Gviz,
org.Mm.eg.db, rebook, rmarkdown, Rsamtools, rtracklayer,
TxDb.Mmusculus.UCSC.mm10.knownGene
AnnotationHub, batchelor, BiocFileCache, BiocNeighbors,
BiocParallel, BiocSingular, bluster, clustree, corral, densvis,
DropletTestFiles, DropletUtils, edgeR, ggbeeswarm, ggplot2,
gridExtra, igraph, iSEE, limma, msigdbr, mumosa, org.Mm.eg.db,
PCAtools, pheatmap, rebook, rmarkdown, Rtsne, scater,
scDblFinder, scPCA, scran, scRNAseq (>= 2.17.9), scuttle,
SingleR, slingshot, snifter, TENxBrainData, tradeSeq, TSCAN,
velociraptor, viridis
AnnotationHub, apcluster, AUCell, BiocFileCache, BiocSingular,
bluster, celldex, cluster, dendextend, dynamicTreeCut, GO.db,
gridExtra, GSEABase, igraph, limma, mbkmeans, org.Mm.eg.db,
pheatmap, rebook, rmarkdown, RMTstat, robustbase, Rtsne,
scater, scran, scRNAseq, scuttle, SingleR, statmod, viridis
batchelor, BiocFileCache, BiocManager, bluster,
DropletTestFiles, DropletUtils, gridExtra, knitr,
LoomExperiment, R.utils, readxl, rebook, rmarkdown,
rtracklayer, scater, scran, scRNAseq, scuttle,
SingleCellExperiment, uwot, zellkonverter
batchelor, BiocSingular, bluster, DropletUtils, edgeR,
gridExtra, igraph, MouseGastrulationData, pheatmap, rebook,
rmarkdown, Rtsne, scater, scran, scuttle, SingleR,
TENxPBMCData, TSCAN, uwot, viridis
AnnotationHub, batchelor, BiocFileCache, BiocNeighbors,
BiocParallel, BiocSingular, bluster, celldex, cluster,
DropletTestFiles, DropletUtils, dynamicTreeCut, edgeR,
EnsDb.Hsapiens.v86, gridExtra, HCAData, igraph, limma,
org.Hs.eg.db, org.Mm.eg.db, pheatmap, rebook, rmarkdown,
scater, scPCA, scran, scRNAseq, scuttle, SingleR, viridis
AnnotationHub, BiocNeighbors, BiocParallel, BiocStyle,
bluster, celldex, gridExtra, igraph, knitr, ontoProc, pheatmap,
rebook, rmarkdown, scater, scran, scRNAseq, scuttle, SingleR,
TENxPBMCData, viridis
HiCExperiment, HiCool, HiContacts, HiContactsData, DNAZooData,
fourDNData, plyinteractions, GenomicInteractions, terra, Rfast,
WGCNA, diffHic, strawr, multiHiCcompare, TopDom, GOTHiC,
BSgenome.Hsapiens.UCSC.hg38, ggbio, cowplot, patchwork, fs,
knitr, BiocStyle, sessioninfo
OSCA.intro, OSCA.basic, OSCA.advanced, OSCA.workflows,
OSCA.multisample