CHANGES IN VERSION 1.2.0 (2024-04-27) --------------------------------------- USER VISIBLE CHANGES o Prompt an error when a 0-byte BAM file is passed as an argument. o Added a new filtering strategy based on stranded genomic windows that can be used when input RNA-seq data is stranded. o gDNAx objects store now also strandedness estimated values. o identifyStrandMode() has been deprecated in favor of strandedness(). o gDNAdx() can now automatically guess library layout and protocol. o Added a new function gDNAtx() that performs filtering with the most common default strategy. BUG FIXES o Bug fix in the show method for gDNAx objects. o Bug fix when the genome() getter on GAlignment* objects is not NA. CHANGES IN VERSION 0.99.6 (2023-05-26) --------------------------------------- USER VISIBLE CHANGES o Submission of the first version to the Bioconductor project.