BioSeqClass
This package is for version 3.9 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see BioSeqClass.
Classification for Biological Sequences
Bioconductor version: 3.9
Extracting Features from Biological Sequences and Building Classification Model
Author: Li Hong sysptm@gmail.com
Maintainer: Li Hong <sysptm at gmail.com>
Citation (from within R, enter
citation("BioSeqClass")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("BioSeqClass")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("BioSeqClass")| Using the BioSeqClass Package | R Script | |
| Reference Manual |
Details
| biocViews | Classification, Software |
| Version | 1.42.0 |
| In Bioconductor since | BioC 2.5 (R-2.10) (14.5 years) |
| License | LGPL (>= 2.0) |
| Depends | R (>= 2.10), scatterplot3d |
| Imports | Biostrings, ipred, e1071, klaR, randomForest, class, tree, nnet, rpart, party, foreign, Biobase, utils, stats, grDevices |
| System Requirements | |
| URL |
See More
| Suggests | scatterplot3d |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | BioSeqClass_1.42.0.tar.gz |
| Windows Binary | BioSeqClass_1.42.0.zip |
| Mac OS X 10.11 (El Capitan) | BioSeqClass_1.42.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/BioSeqClass |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/BioSeqClass |
| Bioc Package Browser | https://code.bioconductor.org/browse/BioSeqClass/ |
| Package Short Url | https://bioconductor.org/packages/BioSeqClass/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.9 | Source Archive |