CHANGES IN VERSION 1.8.0 ------------------------- NEW FUNCTIONS o OncogenicPathways - Perform enrichment for known oncogenic pathways from TCGA studies. o PlotOncogenicPathways - Plots OncogenicPathways results o drugInteractions - Drug gene interactions from DGIB database. SIGNIFICANT USER-LEVEL IMPROVEMENT o trinucleotideMatrix functions now works with BSgenomes instead of time consuming fasta files o rainfallPlot now detects Kataegis based on a greedy algorithm