Changes in version v1.0.12 (2019-04-07)

+ Fix: filtering by group uses the Leading Razor Protein when the filter
"protein_groups: remove" is selected
+ Fix: `plotSP` of `artmsQualityControlEvidenceExtended` fails with old versions
of MaxQuant
+ artmsProtein2SiteConversion also processes RefSeq annotations

Changes in version v1.0.11 (2019-03-25)

+ Fix: column namne MS/MS count for old versions of MaxQuant

Changes in version v1.0.10 (2019-02-22)

+ Fix: final fix of build problems
¡
Changes in version v1.0.9 (2019-02-21)

+ Fix: build problem

Changes in version v1.0.8 (2019-02-18)

+ Fix: Remove abundance files to prevent users' confusions
+ Fix: use "Leading Razor Protein" as main protein ID

Changes in version v1.0.7 (2019-02-18)

+ Bug fix: update annotations to process species without support by bioconductor
annotation packages.
+ Improve messages to the user

Changes in version v1.0.6 (2019-01-21)

+ Bug fix (checkfile)

Changes in version v1.0.5 (2019-01-20)

+ Update the vignette

Changes in version v1.0.3 (2019-01-20)

+ bug fix: pre-formatted mss file now works

Changes in version v1.0.2 (2019-01-19)

+ Fixed error: the condition has length (from bioc 3.9)
+ Fixed bug with artmsVolcanoPlot

Changes in version v1.0.1 (2018-10-29)

+ Fixed bug on artmsProtein2SiteConvertion

Changes in version v1.0.0 (2018-10-29)

+ artMS is officially released

Changes in version v0.99.102 (2018-10-27)

+ Fix bug in artmsConvertMetabolomics()

Changes in version v0.99.101

+ Update vignettes

Changes in version v0.99.100

+ This version addresses all the suggestions and comments raised by the bioconductor's reviewer
+ Incorporates functions to handle Metabolomics based on the Markview alignment table

Changes in version v0.99.52

+ Updated Vignette extensively
    
Changes in version 0.99.25

+ Update Vignette to just output html

Changes in version 0.99.02

+ Add the Bioconductor webhook

Changes in version 0.99.01

+ Submit the package to the Bioconductor project

For Developers

+ All the functions name must have the prefix 'artms'

+ Normalized all documentation using roxygen2
    
Deprecated

+ Nothing yet

Defunct

+ Nothing yet