0.99.0 (01-09-2017)
+ Code has been tested and is stable. Preparing for submission to Bioconductor once vignette (and various other requirements) is complete.
0.99.0 (01-18-2017)	
 Vignette completed testing
0.99.0 (01-20-2017)
+ Package (version 0.99.0) submitted to Bioconductor for review
0.99.2 (02-24-2017)
+ Revised package (version 0.99.2) submitted to Bioconductor for further review
0.99.2 (04-18-2017)
+ Revised package (version 0.99.2) submitted to Bioconductor for review
1.0.0 (04-19-2017)
+ Package accepted (version 1.0.0) at Bioconductor, included in version 3.5.
1.2.0 (09-26-2017) 
+ Support added for the analysis of ESTs/cDNAs; BED files can now be provided as input (version 1.2.0)
1.2.1 (10-17-2017)
+ Minor changes in documentation to better reflect updates in v. 1.2 (version 1.2.1).
1.8.0 (07-10-2018)
+ Additional promoter (TSR) metrics added to output, including the modified shape index (mSI) and torque.
+ Modifications to column IDs to reflect updated nomenclature.
+ Updates to User's Guide in addition to creation of Singularity recipe for reproucible analysis across platforms.
1.8.9 (10-08-2018)
+ Updates that correct a speed issue encountered when analyzing data aligned to assemblies with many scaffolds.
+ Simplified part of one vignette.