Changes in version 2.12.0:

    o   pcair and pcrelate have been completely rewritten for better
	 consistency with other methods. Some argument names have changed;
	 see the documentation. The output of pcrelate is now a list of
	 data.frames instead of a list of matrices.

    o   pcrelateReadKinship and pcrelateReadInbreed are deprecated, as these
	 tables are now returned by pcrelate.

    o   pcrelateMakeGRM is deprecated; use pcrelateToMatrix with new
	 pcrelate output format.

    o   king2mat is deprecated; use kingToMatrix instead.

    o   fitNullMM, fitNullReg, assocTestMM, and admixMapMM are deprecated.
	 assocTestSeq and assocTestSeqWindow are defunct. Use fitNullModel,
	 assocTestSingle, assocTestAggregate, and admixMap instead.

Changes in version 2.11.15:

    o   Refactor pcrelate.

Changes in version 2.11.14:

    o   Added assocTestAggregate method for GenotypeData objects.

Changes in version 2.11.11:

    o   Refactor pcair.

Changes in version 2.11.8:

    o   Added admixMap function to replace admixMapMM.

Changes in version 2.11.4:

    o   Added assocTestSingle and fitNullModel methods for GenotypeData
	 objects.

Changes in version 2.9.3:

    o   New methods assocTestSingle and assocTestAggregate are refactors of
	 assocTestMM and assocTestSeq/assocTestSeqWindow, respectively.
	 assocTestSeq and assocTestSeqWindow are deprecated. assocTestMM is
	 still used for GenotypeData objects, but will be deprecated in a
	 future release. fitNullModel is a refactor of fitNullMM/fitNullReg
	 and should be used with the new association test methods.

Changes in version 2.7.4:

    o   In fitNullMM, for Binomial and Poisson GLM families, the variance of
	 the fixed effects will not be multiplied by the dispersion
	 parameter RSS.

Changes in version 2.7.3:

    o   Change defaults in assocTestSeq*: Davies method for SKAT p-values,
	 flat weights.

Changes in version 2.6.0:

    o   Major bug fix: assocTestSeq no longer drops some variants from
	 aggregate tests in the case where the same variants are included in
	 more than one aggregate unit.

    o   Added function for analysis of admixture mapping data.

Changes in version 2.2.0:

    o   Added support for sequence data files created with the SeqArray
	 package.

    o   Added functions for Burden and SKAT tests of sequence data.

Changes in version 2.0.0:

    o   Added functions for PC-Relate.  PC-Relate provides model-free
	 estimation of recent genetic relatedness in general samples.  It
	 can be used to estimate kinship coefficients, IBD sharing
	 probabilities, and inbreeding coefficients using genome-wide SNP
	 data.  PC-Relate accounts for population structure (ancestry) among
	 sample individuals through the use of ancestry representative
	 principal components (PCs) to provide accurate relatedness
	 estimates due only to recent family (pedigree) structure.

    o   GENESIS now imports the package gdsfmt.

Changes in version 1.1.1:

    o   Changed a few default values: MAF filter from 0.05 to 0.01;
	 kin.thresh from 0.025 to 2^(-11/2) ~ 0.022; div.thresh from -0.025
	 to -2^(-11/2) ~ -0.022; v (the number of PCs returned) from 10 to
	 20

    o   Changed the argument 'block.size' to 'snp.block.size'

    o   Slightly altered the command line reporting when verbose = TRUE

Changes in version 0.99.4:

    o   Fixed a minor bug to zero out diagonal of divMat in pcairPartition()

Changes in version 0.99.0:

    o   Initial version of GENESIS.  Contains functionality to perform
	 PC-AiR.