plateCore
This package is for version 3.8 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see plateCore.
Statistical tools and data structures for plate-based flow cytometry
Bioconductor version: 3.8
Provides basic S4 data structures and routines for analyzing plate based flow cytometry data.
Author: Errol Strain, Florian Hahne, and Perry Haaland
Maintainer: Errol Strain <estrain at gmail.com>
Citation (from within R, enter
citation("plateCore")):
Installation
To install this package, start R (version "3.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("plateCore")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("plateCore")| An R Package for Analysis of High Throughput Flow Cytometry Data | R Script | |
| Reference Manual |
Details
| biocViews | CellBasedAssays, FlowCytometry, ImmunoOncology, Infrastructure, Software |
| Version | 1.40.1 |
| In Bioconductor since | BioC 2.5 (R-2.10) (14.5 years) |
| License | Artistic-2.0 |
| Depends | R (>= 2.10), flowCore, flowViz, lattice, latticeExtra |
| Imports | Biobase, flowCore, graphics, grDevices, lattice, MASS, methods, robustbase, stats, utils, flowStats |
| System Requirements | |
| URL | http://www.bioconductor.org |
See More
| Suggests | gplots |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | plateCore_1.40.1.tar.gz |
| Windows Binary | plateCore_1.40.1.zip |
| Mac OS X 10.11 (El Capitan) | plateCore_1.40.1.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/plateCore |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/plateCore |
| Bioc Package Browser | https://code.bioconductor.org/browse/plateCore/ |
| Package Short Url | https://bioconductor.org/packages/plateCore/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.8 | Source Archive |