onlineFDR
This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see onlineFDR.
Online FDR control
Bioconductor version: 3.8
This package allows users to control the false discovery rate for online hypothesis testing, where hypotheses arrive sequentially in a stream, as presented by Javanmard and Montanari (2015, 2018). In this framework, a null hypothesis is rejected based only on the previous decisions, as the future p-values and the number of hypotheses to be tested are unknown.
Author: David Robertson [aut, cre], Adel Javanmard [aut], Andrea Montanari [aut], Natasha Karp [aut]
Maintainer: David Robertson <david.robertson at mrc-bsu.cam.ac.uk>
citation("onlineFDR")):
Installation
To install this package, start R (version "3.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("onlineFDR")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("onlineFDR")| Using the onlineFDR package | HTML | R Script |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | MultipleComparison, Software, StatisticalMethod |
| Version | 1.0.0 |
| In Bioconductor since | BioC 3.8 (R-3.5) (5.5 years) |
| License | GPL-3 |
| Depends | |
| Imports | stats |
| System Requirements | |
| URL |
See More
| Suggests | knitr, rmarkdown, testthat |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | onlineFDR_1.0.0.tar.gz |
| Windows Binary | onlineFDR_1.0.0.zip |
| Mac OS X 10.11 (El Capitan) | onlineFDR_1.0.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/onlineFDR |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/onlineFDR |
| Bioc Package Browser | https://code.bioconductor.org/browse/onlineFDR/ |
| Package Short Url | https://bioconductor.org/packages/onlineFDR/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.8 | Source Archive |