DmelSGI
This package is for version 3.7 of Bioconductor; for the stable, up-to-date release version, see DmelSGI.
Experimental data and documented source code for the paper "A Map of Directional Genetic Interactions in a Metazoan Cell"
Bioconductor version: 3.7
The package contains the experimental data and documented source code of the manuscript "Fischer et al., A Map of Directional Genetic Interactions in a Metazoan Cell, eLife, 2015, in Press.". The vignette code generates all figures in the paper.
Author: Bernd Fischer
Maintainer: Bernd Fischer <b.fischer at dkfz.de>
citation("DmelSGI")):
Installation
To install this package, start R (version "3.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("DmelSGI")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("DmelSGI")| DmelSGI | R Script | |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | CellCulture, Drosophila_melanogaster_Data, ExperimentData, HighThroughputImagingData, HighthroughputImagingData, MicrotitrePlateAssayData, ReproducibleResearch |
| Version | 1.12.0 |
| License | Artistic-2.0 |
| Depends | R (>= 3.0) |
| Imports | grid, TSP, limma, rhdf5, knitr, abind, gplots, igraph |
| System Requirements | |
| URL |
See More
| Suggests | BiocStyle, EBImage, RColorBrewer, RNAinteractMAPK, RSVGTipsDevice, cgdsr, hwriter, xtable, beeswarm |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | DmelSGI_1.12.0.tar.gz |
| Windows Binary | |
| Mac OS X 10.11 (El Capitan) | |
| Source Repository | git clone https://git.bioconductor.org/packages/DmelSGI |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/DmelSGI |
| Package Short Url | https://bioconductor.org/packages/DmelSGI/ |
| Package Downloads Report | Download Stats |