BSgenome.Hsapiens.1000genomes.hs37d5
This package is for version 3.7 of Bioconductor; for the stable, up-to-date release version, see BSgenome.Hsapiens.1000genomes.hs37d5.
1000genomes Reference Genome Sequence (hs37d5)
Bioconductor version: 3.7
1000genomes Phase2 Reference Genome Sequence (hs37d5), based on NCBI GRCh37.
Author: Julian Gehring
Maintainer: Julian Gehring <jg-bioc at gmx.com>
Citation (from within R, enter
citation("BSgenome.Hsapiens.1000genomes.hs37d5")):
Installation
To install this package, start R (version "3.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("BSgenome.Hsapiens.1000genomes.hs37d5")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
| Reference Manual |
Details
| biocViews | AnnotationData, BSgenome, Genetics, Homo_sapiens |
| Version | 0.99.1 |
| License | Artistic-2.0 |
| Depends | BSgenome(>= 1.34.0) |
| Imports | |
| System Requirements | |
| URL |
See More
| Suggests | |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | SparseSignatures |
| Suggests Me | MutationalPatterns, SomaticSignatures, VariantFiltering |
| Links To Me |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | BSgenome.Hsapiens.1000genomes.hs37d5_0.99.1.tar.gz |
| Windows Binary | |
| Mac OS X 10.11 (El Capitan) | |
| Package Short Url | https://bioconductor.org/packages/BSgenome.Hsapiens.1000genomes.hs37d5/ |
| Package Downloads Report | Download Stats |