Changes in version 1.4.0:

NEW FEATURES

    o   interest() and interest.sequential() functions now support "IntSpan"
	 method, allows counting intron- spanning reads.

    o   psi() function is added. It calculates Psi values.

    o   annotateU12() fucntion supports DNAStringSet objects as its
	 refGenome input.

    o   Improved vignette document.

SIGNIFICANT USER-VISIBLE CHANGES

    o   eBayesInterest() removed.

BUG FIXES

    o   interest.sequential() and interest() corrections to their object
	 output option.

    o   annotateU12() modified to work correctly with the new changes in
	 Biostrings package.