survcomp
This package is for version 3.7 of Bioconductor; for the stable, up-to-date release version, see survcomp.
Performance Assessment and Comparison for Survival Analysis
Bioconductor version: 3.7
Assessment and Comparison for Performance of Risk Prediction (Survival) Models.
Author: Benjamin Haibe-Kains, Markus Schroeder, Catharina Olsen, Christos Sotiriou, Gianluca Bontempi, John Quackenbush, Samuel Branders, Zhaleh Safikhani
Maintainer: Benjamin Haibe-Kains <benjamin.haibe.kains at utoronto.ca>, Markus Schroeder <markus.schroeder at ucdconnect.ie>, Catharina Olsen <colsen at ulb.ac.be>
citation("survcomp")
):
Installation
To install this package, start R (version "3.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("survcomp")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("survcomp")
SurvComp: a package for performance assessment and comparison for survival analysis | R Script | |
Reference Manual |
Details
biocViews | DifferentialExpression, GeneExpression, Software, Visualization |
Version | 1.30.0 |
In Bioconductor since | BioC 2.8 (R-2.13) (13 years) |
License | Artistic-2.0 |
Depends | survival, prodlim, R (>= 3.4) |
Imports | ipred, SuppDists, KernSmooth, survivalROC, bootstrap, grid, rmeta, stats, graphics |
System Requirements | |
URL | http://www.pmgenomics.ca/bhklab/ |
See More
Suggests | Hmisc, CPE, clinfun, xtable, Biobase |
Linking To | |
Enhances | |
Depends On Me | genefu |
Imports Me | GenRank |
Suggests Me | breastCancerMAINZ, breastCancerNKI, breastCancerTRANSBIG, breastCancerUNT, breastCancerUPP, breastCancerVDX, metaseqR |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | survcomp_1.30.0.tar.gz |
Windows Binary | survcomp_1.30.0.zip (32- & 64-bit) |
Mac OS X 10.11 (El Capitan) | survcomp_1.30.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/survcomp |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/survcomp |
Package Short Url | https://bioconductor.org/packages/survcomp/ |
Package Downloads Report | Download Stats |
Old Source Packages for BioC 3.7 | Source Archive |