rHVDM

This package is for version 3.7 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see rHVDM.

Hidden Variable Dynamic Modeling


Bioconductor version: 3.7

A R implementation of HVDM (Genome Biol 2006, V7(3) R25)

Author: Martino Barenco

Maintainer: Martino Barenco<m.barenco at ucl.ac.uk>

Citation (from within R, enter citation("rHVDM")):

Installation

To install this package, start R (version "3.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("rHVDM")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("rHVDM")
rHVDM primer PDF R Script
Reference Manual PDF

Details

biocViews Classification, GraphAndNetwork, Microarray, NetworkInference, Software, Transcription
Version 1.46.0
In Bioconductor since BioC 2.0 (R-2.5) (17 years)
License GPL-2
Depends R (>= 2.10), R2HTML (>= 1.5), affy(>= 1.23.4), minpack.lm (>= 1.0-5), Biobase(>= 2.5.5)
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package rHVDM_1.46.0.tar.gz
Windows Binary rHVDM_1.46.0.zip
Mac OS X 10.11 (El Capitan) rHVDM_1.46.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/rHVDM
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/rHVDM
Package Short Url https://bioconductor.org/packages/rHVDM/
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Old Source Packages for BioC 3.7 Source Archive