mirIntegrator
This package is for version 3.7 of Bioconductor; for the stable, up-to-date release version, see mirIntegrator.
Integrating microRNA expression into signaling pathways for pathway analysis
Bioconductor version: 3.7
Tools for augmenting signaling pathways to perform pathway analysis of microRNA and mRNA expression levels.
Author: Diana Diaz <dmd at wayne dot edu>
Maintainer: Diana Diaz <dmd at wayne.edu>
Citation (from within R, enter
citation("mirIntegrator")
):
Installation
To install this package, start R (version "3.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("mirIntegrator")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("mirIntegrator")
mirIntegrator Overview | R Script | |
Reference Manual | ||
NEWS | Text |
Details
biocViews | GraphAndNetwork, KEGG, Microarray, Network, Pathways, Software |
Version | 1.10.0 |
In Bioconductor since | BioC 3.2 (R-3.2) (8.5 years) |
License | GPL (>=3) |
Depends | R (>= 3.3) |
Imports | graph, ROntoTools, ggplot2, org.Hs.eg.db, AnnotationDbi, Rgraphviz |
System Requirements | |
URL | http://datad.github.io/mirIntegrator/ |
See More
Suggests | RUnit, BiocGenerics |
Linking To | |
Enhances | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | mirIntegrator_1.10.0.tar.gz |
Windows Binary | mirIntegrator_1.10.0.zip |
Mac OS X 10.11 (El Capitan) | mirIntegrator_1.10.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/mirIntegrator |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/mirIntegrator |
Package Short Url | https://bioconductor.org/packages/mirIntegrator/ |
Package Downloads Report | Download Stats |
Old Source Packages for BioC 3.7 | Source Archive |