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geneClassifiers

This package is for version 3.7 of Bioconductor; for the stable, up-to-date release version, see geneClassifiers.

Application of gene classifiers


Bioconductor version: 3.7

This packages aims for easy accessible application of classifiers which have been published in literature using an ExpressionSet as input.

Author: R Kuiper

Maintainer: R Kuiper <r.kuiper.emc at gmail.com>

Citation (from within R, enter citation("geneClassifiers")):

Installation

To install this package, start R (version "3.5") and enter: 


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("geneClassifiers")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("geneClassifiers")
geneClassifiers and missing probesets PDF
geneClassifiers introduction PDF R Script
Reference Manual PDF
NEWS Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews BiomedicalInformatics, Classification, GeneExpression, Microarray, Software, Survival
Version 1.4.0
In Bioconductor since BioC 3.5 (R-3.4) (7 years)
License GPL-2
Depends utils
Imports methods, stats, Biobase, BiocGenerics
System Requirements
URL
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Suggests testthat
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package geneClassifiers_1.4.0.tar.gz
Windows Binary geneClassifiers_1.4.0.zip
Mac OS X 10.11 (El Capitan) geneClassifiers_1.4.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/geneClassifiers
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/geneClassifiers
Package Short Url https://bioconductor.org/packages/geneClassifiers/
Package Downloads Report Download Stats
Old Source Packages for BioC 3.7 Source Archive