flowType

This package is for version 3.7 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see flowType.

Phenotyping Flow Cytometry Assays

Bioconductor version: 3.7

Phenotyping Flow Cytometry Assays using multidimentional expansion of single dimentional partitions.

Author: Nima Aghaeepour, Kieran O'Neill, Adrin Jalali

Maintainer: Nima Aghaeepour <naghaeep at gmail.com>

Citation (from within R, enter citation("flowType")):

Installation

To install this package, start R (version "3.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("flowType")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("flowType")

flowType package	PDF	R Script
Reference Manual	PDF
NEWS	Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	FlowCytometry, Software
Version	2.18.0
In Bioconductor since	BioC 2.9 (R-2.14) (12.5 years)
License	Artistic-2.0
Depends	R (>= 2.10), Rcpp (>= 0.10.4), BH (>= 1.51.0-3)
Imports	Biobase, graphics, grDevices, methods, flowCore, flowMeans, sfsmisc, rrcov, flowClust, flowMerge, stats
System Requirements
URL

Suggests	xtable
Linking To	Rcpp, BH
Enhances
Depends On Me
Imports Me	RchyOptimyx
Suggests Me
Links To Me
Build Report	Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	flowType_2.18.0.tar.gz
Windows Binary	flowType_2.18.0.zip (32- & 64-bit)
Mac OS X 10.11 (El Capitan)	flowType_2.18.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/flowType
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/flowType
Package Short Url	https://bioconductor.org/packages/flowType/
Package Downloads Report	Download Stats
Old Source Packages for BioC 3.7	Source Archive