derfinderHelper
This package is for version 3.7 of Bioconductor; for the stable, up-to-date release version, see derfinderHelper.
derfinder helper package
Bioconductor version: 3.7
Helper package for speeding up the derfinder package when using multiple cores.
Author: Leonardo Collado-Torres [aut, cre], Andrew E. Jaffe [aut], Jeffrey T. Leek [aut, ths]
Maintainer: Leonardo Collado-Torres <lcollado at jhu.edu>
Citation (from within R, enter
citation("derfinderHelper")):
Installation
To install this package, start R (version "3.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("derfinderHelper")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("derfinderHelper")| Introduction to derfinderHelper | HTML | R Script |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | DifferentialExpression, RNASeq, Sequencing, Software |
| Version | 1.14.0 |
| In Bioconductor since | BioC 3.0 (R-3.1) (9.5 years) |
| License | Artistic-2.0 |
| Depends | R (>= 3.2.2) |
| Imports | IRanges(>= 1.99.27), Matrix, methods, S4Vectors(>= 0.2.2) |
| System Requirements | |
| URL | https://github.com/leekgroup/derfinderHelper |
| Bug Reports | https://support.bioconductor.org/t/derfinderHelper |
See More
| Suggests | devtools (>= 1.6), knitcitations (>= 1.0.1), knitr (>= 1.6), BiocStyle(>= 2.5.19), rmarkdown (>= 0.3.3), testthat |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | derfinder |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | derfinderHelper_1.14.0.tar.gz |
| Windows Binary | derfinderHelper_1.14.0.zip |
| Mac OS X 10.11 (El Capitan) | derfinderHelper_1.14.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/derfinderHelper |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/derfinderHelper |
| Package Short Url | https://bioconductor.org/packages/derfinderHelper/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.7 | Source Archive |