ITALICS

This package is for version 3.7 of Bioconductor; for the stable, up-to-date release version, see ITALICS.

ITALICS


Bioconductor version: 3.7

A Method to normalize of Affymetrix GeneChip Human Mapping 100K and 500K set

Author: Guillem Rigaill, Philippe Hupe

Maintainer: Guillem Rigaill <italics at curie.fr>

Citation (from within R, enter citation("ITALICS")):

Installation

To install this package, start R (version "3.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("ITALICS")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ITALICS")
ITALICS PDF R Script
Reference Manual PDF

Details

biocViews CopyNumberVariation, Microarray, Software
Version 2.40.0
In Bioconductor since BioC 2.3 (R-2.8) (15.5 years)
License GPL-2
Depends R (>= 2.0.0), GLAD, ITALICSData, oligo, affxparser, pd.mapping50k.xba240
Imports affxparser, DBI, GLAD, oligo, oligoClasses, stats
System Requirements
URL http://bioinfo.curie.fr
See More
Suggests pd.mapping50k.hind240, pd.mapping250k.sty, pd.mapping250k.nsp
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package ITALICS_2.40.0.tar.gz
Windows Binary ITALICS_2.40.0.zip
Mac OS X 10.11 (El Capitan) ITALICS_2.40.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/ITALICS
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/ITALICS
Package Short Url https://bioconductor.org/packages/ITALICS/
Package Downloads Report Download Stats
Old Source Packages for BioC 3.7 Source Archive