minfiData

This package is for version 3.6 of Bioconductor; for the stable, up-to-date release version, see minfiData.

Example data for the Illumina Methylation 450k array


Bioconductor version: 3.6

Data from 6 samples across 2 groups from 450k methylation arrays.

Author: Kasper Daniel Hansen, Martin Aryee, Winston Timp

Maintainer: Kasper Daniel Hansen <kasperdanielhansen at gmail.com>

Citation (from within R, enter citation("minfiData")):

Installation

To install this package, start R (version "3.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("minfiData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF
NEWS Text

Details

biocViews ExperimentData, Homo_sapiens_Data, MethylationArrayData, MicroarrayData
Version 0.24.0
License Artistic-2.0
Depends R (>= 3.3.0), minfi(>= 1.21.2), IlluminaHumanMethylation450kmanifest, IlluminaHumanMethylation450kanno.ilmn12.hg19
Imports
System Requirements
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Depends On Me
Imports Me
Suggests Me bigmelon, conumee, ENmix, funtooNorm, Harman, MEAL, MethylAid, methyvim, minfi, missMethyl, MultiDataSet, shinyMethyl, skewr
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package minfiData_0.24.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository git clone https://git.bioconductor.org/packages/minfiData
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/minfiData
Package Short Url https://bioconductor.org/packages/minfiData/
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