RNAinteractMAPK

This package is for version 3.6 of Bioconductor; for the stable, up-to-date release version, see RNAinteractMAPK.

Mapping of Signalling Networks through Synthetic Genetic Interaction Analysis by RNAi


Bioconductor version: 3.6

This package includes all data used in the paper -Mapping of Signalling Networks through Synthetic Genetic Interaction Analysis by RNAi- by Horn, Sandmann, Fischer et al.., Nat. Methods, 2011. The package vignette shows the R code to reproduce all figures in the paper.

Author: Bernd Fischer <b.fischer at dkfz.de>

Maintainer: Bernd Fischer <b.fischer at dkfz.de>

Citation (from within R, enter citation("RNAinteractMAPK")):

Installation

To install this package, start R (version "3.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("RNAinteractMAPK")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("RNAinteractMAPK")
RNAinteractMAPK PDF R Script
Reference Manual PDF

Details

biocViews CellCulture, Drosophila_melanogaster_Data, ExperimentData, MicrotitrePlateAssayData
Version 1.16.0
License Artistic-2.0
Depends R (>= 2.12.0), methods, fields, sparseLDA, RNAinteract
Imports grid, gdata, MASS, genefilter
System Requirements
URL
See More
Suggests qvalue, lattice
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me DmelSGI
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package RNAinteractMAPK_1.16.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository git clone https://git.bioconductor.org/packages/RNAinteractMAPK
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/RNAinteractMAPK
Package Short Url https://bioconductor.org/packages/RNAinteractMAPK/
Package Downloads Report Download Stats