prot2D

This package is for version 3.6 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see prot2D.

Statistical Tools for volume data from 2D Gel Electrophoresis


Bioconductor version: 3.6

The purpose of this package is to analyze (i.e. Normalize and select significant spots) data issued from 2D GEl experiments

Author: Sebastien Artigaud

Maintainer: Sebastien Artigaud <sebastien.artigaud at gmx.com>

Citation (from within R, enter citation("prot2D")):

Installation

To install this package, start R (version "3.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("prot2D")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("prot2D")
prot2D PDF R Script
Reference Manual PDF

Details

biocViews DifferentialExpression, MultipleComparison, Proteomics, Software
Version 1.16.0
In Bioconductor since BioC 2.13 (R-3.0) (10.5 years)
License GPL (>= 2)
Depends R (>= 2.15), fdrtool, st, samr, Biobase, limma, Mulcom, impute, MASS, qvalue
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package prot2D_1.16.0.tar.gz
Windows Binary prot2D_1.16.0.zip
Mac OS X 10.11 (El Capitan) prot2D_1.16.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/prot2D
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/prot2D
Package Short Url https://bioconductor.org/packages/prot2D/
Package Downloads Report Download Stats
Old Source Packages for BioC 3.6 Source Archive