To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("Rgraphviz")

In most cases, you don't need to download the package archive at all.

Rgraphviz

This package is for version 3.4 of Bioconductor; for the stable, up-to-date release version, see Rgraphviz.

Provides plotting capabilities for R graph objects

Bioconductor version: 3.4

Interfaces R with the AT and T graphviz library for plotting R graph objects from the graph package.

Author: Kasper Daniel Hansen [cre, aut], Jeff Gentry [aut], Li Long [aut], Robert Gentleman [aut], Seth Falcon [aut], Florian Hahne [aut], Deepayan Sarkar [aut]

Maintainer: Kasper Daniel Hansen <kasperdanielhansen at gmail.com>

Citation (from within R, enter citation("Rgraphviz")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("Rgraphviz")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Rgraphviz")

PDF	R Script	A New Interface to Plot Graphs Using Rgraphviz
PDF	R Script	How To Plot A Graph Using Rgraphviz
PDF		Reference Manual
Text		NEWS

Details

biocViews	GraphAndNetwork, Software, Visualization
Version	2.18.0
In Bioconductor since	BioC 1.6 (R-2.1) or earlier (> 12 years)
License	EPL
Depends	R (>= 2.6.0), methods, utils, graph, grid
Imports	stats4, graphics, grDevices
LinkingTo
Suggests	RUnit, BiocGenerics, XML
SystemRequirements	optionally Graphviz (>= 2.16)
Enhances
URL
Depends On Me	biocGraph, BioMVCClass, CellNOptR, flowCL, flowMerge, gaucho, GOFunction, MineICA, mvGST, netresponse, paircompviz, pathRender, ROntoTools, SplicingGraphs, TDARACNE, ToPASeq
Imports Me	apComplex, biocGraph, CompGO, CytoML, DEGraph, EnrichmentBrowser, facopy, flowWorkspace, GOFunction, hyperdraw, mirIntegrator, nem, OncoSimulR, paircompviz, pathview, Pigengene, qpgraph, RchyOptimyx, SplicingGraphs, TRONCO
Suggests Me	altcdfenvs, annotate, BiocCaseStudies, Category, CNORfeeder, CNORfuzzy, ddgraph, DEGraph, flowCore, GeneNetworkBuilder, geneplotter, GlobalAncova, globaltest, GOstats, GSEABase, KEGGgraph, MLP, NCIgraph, NCIgraphData, oneChannelGUI, pcaGoPromoter, pkgDepTools, RBGL, RBioinf, rBiopaxParser, RDAVIDWebService, RpsiXML, Rtreemix, safe, SNAData, SPIA, SRAdb, Streamer, topGO, vtpnet
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	Rgraphviz_2.18.0.tar.gz
Windows Binary	Rgraphviz_2.18.0.zip (32- & 64-bit)
Mac OS X 10.9 (Mavericks)	Rgraphviz_2.18.0.tgz
Subversion source	(username/password: readonly)
Git source	https://github.com/Bioconductor-mirror/Rgraphviz/tree/release-3.4
Package Short Url	http://bioconductor.org/packages/Rgraphviz/
Package Downloads Report	Download Stats

Documentation »

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