Package: plotgardener
Title: Coordinate-Based Genomic Visualization Package for R
Version: 1.16.0
Date: 2024-06-28
Author: Nicole Kramer [aut, cre], Eric S. Davis [aut], Craig Wenger
        [aut], Sarah Parker [ctb], Erika Deoudes [art], Michael Love
        [ctb], Douglas H. Phanstiel [aut, cre, cph]
Maintainer: Nicole Kramer <nekramer27@gmail.com>, Douglas Phanstiel
 <douglas_phanstiel@med.unc.edu>
Description: Coordinate-based genomic visualization package for R. It
        grants users the ability to programmatically produce complex,
        multi-paneled figures. Tailored for genomics, plotgardener
        allows users to visualize large complex genomic datasets and
        provides exquisite control over how plots are placed and
        arranged on a page.
Depends: R (>= 4.2.0)
License: MIT + file LICENSE
URL: https://phanstiellab.github.io/plotgardener,
        https://github.com/PhanstielLab/plotgardener
Encoding: UTF-8
RoxygenNote: 7.3.2
Imports: curl, data.table, dplyr, GenomeInfoDb, GenomicRanges, glue,
        grDevices, grid, ggplotify, IRanges, methods, plyranges, purrr,
        Rcpp, RColorBrewer, rhdf5, rlang, stats, strawr, tools, utils,
        withr
biocViews: Visualization, GenomeAnnotation, FunctionalGenomics,
        GenomeAssembly, HiC
LinkingTo: Rcpp
Suggests: AnnotationDbi, AnnotationHub, BSgenome,
        BSgenome.Hsapiens.UCSC.hg19, ComplexHeatmap, GenomicFeatures,
        ggplot2, InteractionSet, knitr, org.Hs.eg.db, rtracklayer,
        plotgardenerData, pdftools, png, rmarkdown, scales, showtext,
        testthat (>= 3.0.0), TxDb.Hsapiens.UCSC.hg19.knownGene,
        TxDb.Hsapiens.UCSC.hg38.knownGene
VignetteBuilder: knitr
Config/testthat/edition: 3
BugReports: https://github.com/PhanstielLab/plotgardener/issues
Config/pak/sysreqs: make libbz2-dev liblzma-dev libxml2-dev libssl-dev
        xz-utils zlib1g-dev
Repository: https://bioc-release.r-universe.dev
Date/Publication: 2025-10-29 15:11:39 UTC
RemoteUrl: https://github.com/bioc/plotgardener
RemoteRef: RELEASE_3_22
RemoteSha: eb3d8c80eaf01da91fa1b6846b714b19142cae2b
NeedsCompilation: yes
Packaged: 2026-03-04 08:54:22 UTC; root
Built: R 4.5.2; x86_64-w64-mingw32; 2026-03-04 08:58:43 UTC; windows
Archs: x64
