arrayQuality
This is the development version of arrayQuality; for the stable release version, see arrayQuality.
Assessing array quality on spotted arrays
Bioconductor version: Development (3.21)
Functions for performing print-run and array level quality assessment.
Author: Agnes Paquet and Jean Yee Hwa Yang <yeehwa at stat.berkeley.edu>
Maintainer: Agnes Paquet <paquetagnes at yahoo.com>
Citation (from within R, enter
citation("arrayQuality")):
Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("arrayQuality")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
| Reference Manual |
Details
| biocViews | Microarray, QualityControl, Software, TwoChannel, Visualization |
| Version | 1.85.0 |
| In Bioconductor since | BioC 1.6 (R-2.1) or earlier (> 19.5 years) |
| License | LGPL |
| Depends | R (>= 2.2.0) |
| Imports | graphics, grDevices, grid, gridBase, hexbin, limma, marray, methods, RColorBrewer, stats, utils |
| System Requirements | |
| URL | http://arrays.ucsf.edu/ |
See More
| Suggests | mclust, MEEBOdata, HEEBOdata |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | arrayQuality_1.85.0.tar.gz |
| Windows Binary (x86_64) | arrayQuality_1.85.0.zip |
| macOS Binary (x86_64) | arrayQuality_1.85.0.tgz |
| macOS Binary (arm64) | |
| Source Repository | git clone https://git.bioconductor.org/packages/arrayQuality |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/arrayQuality |
| Bioc Package Browser | https://code.bioconductor.org/browse/arrayQuality/ |
| Package Short Url | https://bioconductor.org/packages/arrayQuality/ |
| Package Downloads Report | Download Stats |